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+ ---
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+ license: cc-by-nc-4.0
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+ tags: [medical-imaging, segmentation, benchmark]
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+ ---
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+
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+ # GenSeg-Baselines
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+
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+ Baseline benchmark for 2D medical image segmentation: **8 methods x 10 datasets x 3 seeds/folds, 7 metrics**.
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+ Companion to the [GenSegDataset](https://huggingface.co/datasets/MaybeRichard/GenSegDataset).
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+
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+ **Methods:** UNet, UNet++, DeepLabV3+ (ResNet-50/ImageNet), Attention-UNet (scratch),
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+ TransUNet (R50-ViT-B/16), Swin-UNet (Swin-Tiny), nnU-Net v2 (250ep), U-Mamba (UMambaBot, 100ep).
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+
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+ **Datasets:** cvc_clinicdb, kvasir_seg, fives, busi, refuge2, acdc, idridd, pannuke, isic2018, kits19.
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+
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+ **Metrics:** Dice, IoU, HD95, ASSD, Sensitivity, Specificity, Precision (+ efficiency).
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+
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+ ## Layout
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+ - `code/` - baseline framework (train/test/aggregate), scripts, conda envs. *(Generative SegGen code excluded.)*
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+ - `results/` - per-run `metrics.json` + aggregated `summary.{html,csv,md,tex}` + `efficiency.md`.
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+ - `weights/` - curated checkpoints: best seed per (dataset, arch) for framework; best fold for nnU-Net / U-Mamba.
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+
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+ ## Note
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+ These are the **256-px baseline** (confirmed). A resolution-fair re-evaluation (conv methods retrained at a
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+ higher per-dataset resolution; all methods scored at a common R so HD95 is comparable) is in progress and
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+ will be added later.