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https://api.github.com/repos/pandas-dev/pandas/issues/6901
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31,722,662
MDU6SXNzdWUzMTcyMjY2Mg==
6,901
SyntaxError on HDF queries where right-hand contains string delimiter
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20
2014-04-17T12:30:35Z
2016-10-12T23:04:47Z
2014-04-17T23:49:29Z
NONE
null
If your index is a string that contains a `'` or `"` there is potentially no consistent way to do an HDF query from disk. The following is real-ish data from the Wikipedia pagecounts dataset. Worked in 0.12, SyntaxError in 0.13. Easy to reproduce: This is `test.csv` ``` title,hits Al Lawson',30 'Blind' Willie McTell,...
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6,902
API: Stop modifying SQL column and names, and warn when pertinent.
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9
2014-04-17T14:07:00Z
2014-08-21T07:57:05Z
2014-04-22T14:33:16Z
CONTRIBUTOR
null
Closes #6796 If any columns names written `to_sql` via a legacy connection _would_ have been modified by previous versions of pandas, a warning is issued, both on table creation and row insertion. But no names are modified. There is a stray warning message in nosetests. Otherwise good, I think. Does this reflect our ...
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https://api.github.com/repos/pandas-dev/pandas/issues/6903
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31,739,723
MDU6SXNzdWUzMTczOTcyMw==
6,903
Docstring for Series missing description on 'fastpath'
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2014-04-17T16:06:19Z
2014-05-05T13:23:36Z
2014-05-05T13:23:36Z
NONE
null
The Series docstring does not include any description for the 'fastpath' parameter. Couldn't find any example on the website that used this parameter, not sure which needs updating: the init definition or the parameters section. ![image](https://cloud.githubusercontent.com/assets/3363363/2733732/0e121c32-c64a-11e3-8...
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https://api.github.com/repos/pandas-dev/pandas/issues/6904
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31,746,963
MDU6SXNzdWUzMTc0Njk2Mw==
6,904
Panel pct_change bug
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2014-04-17T17:43:19Z
2014-04-21T14:15:49Z
2014-04-21T14:15:49Z
NONE
null
``` File "z:\code\m.py", line 420, in get_panel self.source_panel.pct_change() File "c:\anaconda\lib\site-packages\pandas\core\generic.py", line 3418, in pct_change rs = data / data.shift(periods=periods, freq=freq, **kwds) - 1 TypeError: shift() got an unexpected keyword argument 'periods' ``` > pandas.ve...
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DOC: note about query strings in HDFStore selection
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13
2014-04-17T22:05:28Z
2014-07-16T09:02:14Z
2014-04-17T23:49:30Z
MEMBER
null
closes #6901
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31,772,533
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6,906
Should HDFStore.select respect local variable evaluation rules like query/eval?
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2014-04-17T23:53:04Z
2020-05-16T20:11:25Z
null
MEMBER
null
example from #6901: `test.csv` ``` title,hits Al Lawson',30 'Blind' Willie McTell,20 ``` ``` python df = pd.read_csv('test.csv', index_col=0) store = pd.HDFStore('test.h5') store.append('df', df) ``` should querying work the same as `query`/`eval` for `select` queries? ``` python title = "Al Lawson'" result = stor...
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6,907
Large speed downgrade in function from 0.12 to 0.13
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2014-04-18T04:55:48Z
2014-04-18T20:01:38Z
2014-04-18T15:58:38Z
NONE
null
I only just upgraded to 0.13 so noticing this now. The function below was run on the setup below twice, once with pandas 0.13.1 and another time with 0.12. There is large speed difference as shown in the output. Note that I know that the function as written can be simplified as pd.rolling_std(df1,trail_num, trail_nu...
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6,908
BUG: TimeGrouper outputs different result by column order
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2014-04-18T12:34:42Z
2014-06-21T21:47:54Z
2014-04-19T12:47:08Z
MEMBER
null
closes #6764 `TimeGrouper` may output incorrect results depending on the target column order. The problem seems to be caused by 2 parts. - `TimeGrouper._get_time_bins` and related methods expects sorted values input. - `BinGrouper.get_iterator` expects sorted data input. ``` >>> df = pd.DataFrame({'Branch' : 'A A A ...
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6,909
ENH: Implement Panel pct_change
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2014-04-18T13:10:39Z
2017-04-05T02:08:52Z
2014-04-21T14:15:49Z
CONTRIBUTOR
null
Closes https://github.com/pydata/pandas/issues/6904 There's just a bit of extra index handling that needs to be done before moving on to `generic.pct_change()`. I had to adjust that to use the `.div` and `.sub` ops instead of `/` and `-` to work with panels. I wasn't sure why axis wasn't included as an actual names k...
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6,910
API: Change Panel.shift arg signature to match generic's
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2014-04-18T15:06:20Z
2014-04-22T18:30:43Z
2014-04-22T18:29:10Z
CONTRIBUTOR
null
This surfaced in the Panel `pct_change` implementation at https://github.com/pydata/pandas/pull/6909 `generic`: `def shift(self, periods=1, freq=None, axis=0, **kwds):` `Panel`: `def shift(self, lags, freq=None, axis='major'):` I had to adjust the call to `shift` in `generic.pct_change` to not use a kwarg for `lag...
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6,911
BUG/API: astype(str) should stringify
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2014-04-18T17:37:01Z
2014-04-18T19:34:45Z
2014-04-18T19:34:45Z
CONTRIBUTOR
null
http://stackoverflow.com/questions/23158447/convert-float-to-string-in-pandas currently this just converts to object dtype but not actually stringify could even handle fixed format dtypes: S10 And such as well
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TST: restructure sql tests
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2014-04-19T14:34:29Z
2014-06-25T08:40:32Z
2014-04-21T19:50:30Z
MEMBER
null
- add some explanation of structure of tests - general clean-up (some pep8, docstrings, etc) - move some methods to _TestSQLAlchemy - use standard quoting for sqlite I didn't change any tests, so nothing controversial I think. Wanted to do this first, and then in a subsequent PR try to increase the test coverage.
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ENH: pivot_table can now accept Grouper
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2014-04-19T17:12:53Z
2014-06-13T01:24:57Z
2014-04-27T13:28:37Z
MEMBER
null
`pivot_table` can accept `Grouper` by `index` and `columns` kw. ``` >>> df = pd.DataFrame({ 'Branch' : 'A A A A A A A B'.split(), 'Buyer': 'Carl Mark Carl Carl Joe Joe Joe Carl'.split(), 'Quantity': [1,3,5,1,8,1,9,3], 'Date' : [datetime(2013,11,1,13,0), datetime(2013,9,1,13,5), datetime(2...
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BUG: GroupBy.get_group doesnt work with TimeGrouper
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2014-04-19T18:23:39Z
2014-06-14T08:31:02Z
2014-04-28T14:07:40Z
MEMBER
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`get_group` raises `AttributeError` when the group is created by `TimeGrouper`. ``` >>> df = pd.DataFrame({'Branch' : 'A A A A A A A B'.split(), 'Buyer': 'Carl Mark Carl Carl Joe Joe Joe Carl'.split(), 'Quantity': [1,3,5,1,8,1,9,3], 'Date' : [ ...
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6,915
Bug in pd.Series.mean()
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2014-04-20T00:34:32Z
2014-04-24T15:16:31Z
2014-04-23T20:08:32Z
NONE
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In some cases, the mean is computed incorrectly. Numpy however does the correct calculation. There is no problem with the standard deviation calculation. The following is an example. ``` In [11]: np.array(stateemp.area.tolist()).mean() Out[11]: 23785.447812211703 In [12]: stateemp.area.mean() Out[12]: 58.927762478...
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to_csv `headers` kwarg now works regardless of `index` kwarg
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2014-04-20T16:21:06Z
2014-06-12T04:44:39Z
2014-04-21T05:43:53Z
CONTRIBUTOR
null
Addresses issue https://github.com/pydata/pandas/issues/6186
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DOC: Add recipe for shifting groups of values based on the index
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DOC: provide more inline examples for cookbook.rst
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2014-04-21T21:56:08Z
2021-04-11T04:29:42Z
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CONTRIBUTOR
null
In-line examples when not too long are nice (as well as the link) for example: https://github.com/pydata/pandas/commit/6fe9539b1c9c5f097d64d72af2c2f26e85dfc0b1
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https://api.github.com/repos/pandas-dev/pandas/issues/6919
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31,936,132
MDExOlB1bGxSZXF1ZXN0MTQ5OTE1NjM=
6,919
API: remove the copy kw from .xs to prevent an expectation of a view (which may not be possible)
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2014-04-22T00:21:38Z
2014-06-14T14:25:16Z
2014-04-22T13:09:16Z
CONTRIBUTOR
null
closes #6894 Deprecate passing keyword `copy` to: - `DataFrame/Series/Panel/.xs` - `Panel.minor_xs` - `Panel.major_xs` `.xs` returns a view (as does `.loc`) **IF POSSIBLE** MultiIndexing with Slicers eliminates the need for this (and `.xs` for the too, but for some cases its 'simpler').
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31,966,587
MDU6SXNzdWUzMTk2NjU4Nw==
6,920
DOC: docstring / API for the indexers ([]/ix/loc/iloc)
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2014-04-22T12:02:33Z
2015-03-05T23:30:27Z
2015-03-05T23:30:27Z
CONTRIBUTOR
null
We have this nice comment if you bring up the API page itself by the indexers, but searching and clicking on say pandas.DataFrame.loc just give you an empty page
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31,971,876
MDU6SXNzdWUzMTk3MTg3Ng==
6,921
Sqlachemy raises when writing write timedelta64 columns to sqlite.
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2014-04-22T13:23:43Z
2014-09-06T09:40:27Z
2014-05-11T09:55:01Z
CONTRIBUTOR
null
Maybe we can work around this. At least it should raise informatively. ``` In [24]: df = pd.to_timedelta(Series(['00:00:01', '00:00:03'], name='foo')).to_frame() In [25]: df Out[25]: foo 0 00:00:01 1 00:00:03 [2 rows x 1 columns] In [26]: df.dtypes Out[26]: foo timedelta64[ns] dtype: object In [27]: d...
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PERF: Panel.pct_change
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2014-04-22T13:28:33Z
2018-07-06T20:21:03Z
2017-07-10T21:09:50Z
CONTRIBUTOR
null
related #6826, #6909 Just putting this up there if anyone has any ideas. The filling scales with the length of the axis so this is unavoidable (well it _could_ be done in cython but would need a 3d version of certain functions). can think about changing the default to `fill_method=None` from `fill_method='pad'` ``` ...
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31,973,148
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6,923
series __finalized__ not correctly called in merge?
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2014-04-22T13:39:38Z
2014-04-27T13:34:16Z
2014-04-22T14:21:46Z
CONTRIBUTOR
null
I got some help from Jeff on [stackoverflow](http://stackoverflow.com/questions/23200524/propagate-pandas-series-metadata-through-joins), but either I'm misunderstanding the way `__finalized__` works, or there's a bug in how it's called. My intent was to preserve series metadata after 2 dataframes being merged, and I b...
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BUG/INT: Internal tests for patching __finalize__ / bug in merge not finalizing (GH6923)
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2014-04-22T14:01:12Z
2014-07-09T18:05:32Z
2014-04-22T14:24:08Z
CONTRIBUTOR
null
closes #6923
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31,982,734
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6,925
Bug when using SQLAlchemy and masters' to_sql for integer-named columns in df
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2014-04-22T15:25:00Z
2014-04-22T20:37:57Z
2014-04-22T20:37:57Z
NONE
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Hi- when trying to write a dataframe with non-string named columns via current to_sql the function fails because function _safe_col_name attempts to call the strip method. NB I do not have master installed I just copied the SQL module and call the v14 functions from it. ``` python df = pd.DataFrame(randn(2,4)) con = s...
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6,926
DOC: Unused `order` argument in factorize
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2014-04-22T15:49:31Z
2016-01-27T22:34:10Z
2014-04-22T20:54:18Z
CONTRIBUTOR
null
``` python def factorize(values, sort=False, order=None, na_sentinel=-1): """ Encode input values as an enumerated type or categorical variable Parameters ---------- values : ndarray (1-d) Sequence sort : boolean, default False Sort by values order : na_sentinel: int, de...
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DataFrame.__finalize__ not called in pd.concat
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2014-04-22T16:35:45Z
2014-04-27T13:34:55Z
2014-04-22T19:44:47Z
CONTRIBUTOR
null
When I assign metadata to a df ``` import numpy as np import pandas as pd np.random.seed(10) pd.DataFrame._metadata = ['filename'] df1 = pd.DataFrame(np.random.randint(0, 4, (3, 2)), columns=list('ab')) df1.filenames = {'a': 'f1', 'b': 'f2'} df1 a b 0 1 1 1 0 3 2 0 1 ``` and define a `__fin...
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API/DEPR: Match Panel.shift()'s signature to generic
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2017-04-05T02:08:53Z
2014-04-22T18:29:10Z
CONTRIBUTOR
null
Closes https://github.com/pydata/pandas/issues/6910 Also switches the shift implementation back to using keyword arguments.
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6,929
PERF: Poor numerical stability of rolling_kurt and rolling_skew
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3
2014-04-22T18:16:47Z
2020-11-09T21:20:05Z
2020-11-09T21:20:05Z
CONTRIBUTOR
null
The numerical stability of the current implementation of `rolling_kurt` and `rolling_skew` is very poor: ``` In [14]: x = np.random.rand(10) In [15]: pd.Series(x).rolling(4).skew() Out[15]: 0 NaN 1 NaN 2 NaN 3 -0.971467 4 0.596391 5 -1.163135 6 -0.611469 7 -1.624713 8...
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6,930
API/DEPR: Deprecate order kwarg in factorize
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1
2014-04-22T18:33:03Z
2017-04-05T02:08:49Z
2014-04-22T20:54:18Z
CONTRIBUTOR
null
Closes https://github.com/pydata/pandas/issues/6926 `order` wasn't being used at all. I couldn't use the deprecate_kwarg decorator since the kwarg is being removed, not changed.
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6,931
BUG/INT: Internal tests for patching __finalize__ / bug in concat not finalizing (GH6927)
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0
2014-04-22T19:21:40Z
2014-07-16T09:02:47Z
2014-04-22T19:44:47Z
CONTRIBUTOR
null
closes #6927
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32,003,302
MDU6SXNzdWUzMjAwMzMwMg==
6,932
BUG: add support for writing datetime.date and datetime.time columns using to_sql
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7
2014-04-22T19:35:46Z
2014-08-28T18:03:38Z
2014-08-28T07:03:43Z
NONE
null
Hi- the following commands throw a DataError -- ``` python con = sqlalchemy.create_engine("mssql+pyodbc://server?driver=SQL Server Native Client 11.0") df = pd.DataFrame([datetime.time(7,10), datetime.time(7,20)], columns="a") sql.to_sql(df, "TBL_TEMP", con, index=False) ``` throws the following error: ``` python Tr...
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6,933
PERF: use fastpath=True in Index methods (delete/drop/insert/etc)?
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3
2014-04-22T20:02:27Z
2014-05-05T13:27:58Z
2014-05-05T13:27:58Z
CONTRIBUTOR
null
Been hit by this when optimizing index-oblivious Blocks. In my case, ``` is_deleted = np.zeros(len(index), dtype=np.bool_) is_deleted[deleted_loc] = True index = index[~is_deleted] ``` was still a lot faster then than `index.delete(deleted_loc)`. It appears, that delete doesn't add `fastpath=True` to ctor and that t...
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6,934
BUG: Fix to read decimal seconds from Excel.
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9
2014-04-23T00:34:18Z
2014-06-18T06:59:55Z
2014-04-24T01:24:01Z
CONTRIBUTOR
null
Fix to allow decimal seconds to be read from Excel dates and times into datetime objects. #5945. This required a fix to the `xlrd` module to return milliseconds from Excel dates and times. That fix was recently released to PyPI in xlrd version 0.9.3. Tests, version updates and release note included.
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6,935
BUG: pass bins arg in hist_frame
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2014-04-23T02:43:49Z
2017-04-05T02:08:48Z
2014-04-23T12:44:59Z
CONTRIBUTOR
null
Came up in the comments at https://github.com/pydata/pandas/pull/6850#issuecomment-41119013 Missed passing the `bins` kwarg to a call to matplotlib's hist.
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32,029,684
MDU6SXNzdWUzMjAyOTY4NA==
6,936
ENH: weekday of year, common behavior accessor
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12
2014-04-23T03:09:28Z
2021-04-11T04:30:05Z
null
NONE
null
See below. Dates from the last week of December 2013 are interpreted as being from the first week of the year. Is this due to the fact December 30th was a Monday? ``` python import pandas as pd dt = '2013-12-30' pd.to_datetime(dt, coerce=True).year, pd.to_datetime(dt, coerce=True).weekofyear # I expected: (2013, 53...
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6,937
pandas.io.gbq Version 2
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2014-04-23T03:24:11Z
2014-07-08T13:11:14Z
2014-06-30T19:30:22Z
CONTRIBUTOR
null
closes #5840 (as new interface makes it obsolete) closes #6096 @jreback : We still have some documentation to work on, but we would like your initial thoughts on what we have so far. The key change for this version is the removal of bq.py as a dependency (except as a setup method for a test case). Instead, we rely en...
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32,052,107
MDU6SXNzdWUzMjA1MjEwNw==
6,938
Introduce 'tidy_repr' for DataFrames
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1
2014-04-23T11:20:50Z
2014-04-23T12:33:15Z
2014-04-23T11:24:06Z
CONTRIBUTOR
null
How about adding a `tidy_repr` similar to the one available for Series (https://github.com/pydata/pandas/blob/master/pandas/core/series.py#L845) to the possible ways of displaying a DataFrame. I find this view very convenient for displaying long series. Searching through past issues I couldn't find a discussion on why ...
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32,060,845
MDU6SXNzdWUzMjA2MDg0NQ==
6,939
BUG: regression in max_info_columns behaviour?
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2014-04-23T13:35:07Z
2014-05-14T19:59:17Z
2014-05-14T19:57:32Z
MEMBER
null
Update: - [ ] `max_info_columns` should not behave the same as `max_info_rows`. If `max_info_columns` is exceeded, it should flip to short summary (as `verbose=False`) - [ ] we could add a keyword argument like `show_counts` (or another name) to specify if you want to show the non-null counts (to be able to override th...
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32,073,497
MDU6SXNzdWUzMjA3MzQ5Nw==
6,940
0.13.1: info(verbose=True) does not return non-null counts for large DataFrames
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2014-04-23T15:50:01Z
2014-04-23T19:50:18Z
2014-04-23T15:51:47Z
NONE
null
``` >>>df.info(verbose=True) <class 'pandas.core.frame.DataFrame'> MultiIndex: 9063396 entries, (2011-10-19 00:00:00, 000312) to (2014-03-31 00:00:00, Y8565N10) Data columns (total 5 columns): weight_benchmark float64 weight_portfolio float64 weight_active float64 weight_msci_acwi float64 investable ...
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32,074,485
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6,941
REGR/API: accept TextFileReader in concat (GH6583)
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0
2014-04-23T16:00:53Z
2014-06-17T14:27:30Z
2014-04-23T16:26:27Z
CONTRIBUTOR
null
closes #6583 - API: change AssertionError to TypeError for invalid types passed to concat - REGR: TextFileReader in concat, which was affecting a common user idiom
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6,942
BUG: setitem with at not inferring dtype correctly
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6
2014-04-23T16:43:15Z
2021-05-08T19:49:07Z
null
CONTRIBUTOR
null
xref https://github.com/pandas-dev/pandas/issues/14179 xref #12499 xref #18027 http://stackoverflow.com/questions/23250333/in-pandas-dataframe-after-i-set-an-entire-column-i-cant-update-another-column but `.loc` works ``` In [50]: df = pd.DataFrame(index=pd.date_range(start,periods=1), columns=['timenow',...
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32,100,513
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6,943
BUG: quantile isn't checking for scaler correctly
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2014-04-23T21:20:10Z
2014-04-23T21:24:01Z
2014-04-23T21:24:01Z
CONTRIBUTOR
null
I'm going to do https://github.com/pydata/pandas/issues/4196 (multiple quantiles) But this came up: you get a `result` from _quantile. Then it checks this: ``` python if not np.isscalar and com.is_timedelta64_dtype(result): ``` Should `np.isscalar` be called on result? Currently that `if` block is never entered si...
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6,944
DOC: improve groupby reference docs
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4
2014-04-23T21:20:42Z
2018-01-19T22:04:51Z
null
MEMBER
null
An overview of the reference doc on groupby is given here: http://pandas.pydata.org/pandas-docs/dev/api.html#groupby (apart from the extensive user guide: http://pandas.pydata.org/pandas-docs/dev/groupby.html) There are some things that could use some improvement: - [x] add some missing functions to the overview in...
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32,104,439
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6,945
Series/DataFrame.rank() doesn't handle np.inf properly
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3
2014-04-23T22:12:02Z
2017-12-06T11:29:14Z
2017-12-06T11:29:14Z
CONTRIBUTOR
null
The `rank()` function converts `np.nan` to `np.inf` or `-np.inf`, and therefore can't properly rank existing `np.inf`. See here: https://github.com/pydata/pandas/pull/6886#issuecomment-40773964. Test for this issue here: https://github.com/pydata/pandas/blob/master/pandas/tests/test_series.py#L4071
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6,946
Update indexing.py
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1
2014-04-23T23:47:25Z
2014-07-16T09:02:57Z
2014-04-24T00:12:51Z
CONTRIBUTOR
null
Adding a space
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6,947
BLD: add xlwt py3 version to build matrix
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3
2014-04-24T00:55:13Z
2015-06-20T16:20:18Z
2015-06-20T16:20:18Z
CONTRIBUTOR
null
apparently we are using the regular `xlwt` on the 3.3 build, which doesn't (it skips everything), so need still in dev on xlwt master branch
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32,136,819
MDU6SXNzdWUzMjEzNjgxOQ==
6,948
Bug in rplot.GeomDensity2D
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1
2014-04-24T10:26:57Z
2014-04-24T10:47:52Z
2014-04-24T10:47:52Z
NONE
null
I think line 567 in tools/rplot.py "ax.contour(Z, extent=[x_min, x_max, y_min, y_max])" should be changed to "ax.contour(Z.T, extent=[x_min, x_max, y_min, y_max])" When I plot a density map, the graph is rotated by 90 degrees.
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6,949
BUG: filling doesn't work well for sparse blocks
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1
2014-04-24T10:50:41Z
2016-04-05T21:50:43Z
2016-04-05T21:50:43Z
CONTRIBUTOR
null
``` python In [1]: pd.__version__ Out[1]: '0.13.1' In [2]: pd.DataFrame({'a': pd.SparseArray([1,2,3, np.nan, np.nan]), 'b': [1,2,3,np.nan,np.nan]}) Out[2]: a b 0 1 1 1 2 2 2 3 3 3 NaN NaN 4 NaN NaN [5 rows x 2 columns] In [3]: _2.reindex(_2.index[1:], fill_value=10.) Out[3]: a b 1 2 2 ...
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https://api.github.com/repos/pandas-dev/pandas/issues/6950
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32,141,837
MDU6SXNzdWUzMjE0MTgzNw==
6,950
ENH/CLN: Make df.pivot to the mapping of pivot_table
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8
2014-04-24T11:53:52Z
2016-11-16T09:06:06Z
2016-11-16T09:06:06Z
MEMBER
null
Related to #6913. `DataFrame.pivot` function uses separate logic and has less keyword options than `pandas.tools.pivot_table`. How about making `DataFrame.pivot` to call `pivot_table` internally to support same keywords as `pivot_table`?
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32,146,098
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6,951
BUG: enabling subplots works unexpectedly
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10
2014-04-24T13:02:12Z
2014-06-13T14:50:07Z
2014-04-29T16:29:19Z
MEMBER
null
Found 2 minor issues related to plotting with `subplots=True`. 1. If `DataFrame` only has single column, plot raises `TypeError`. It is because `_subplots` returns `Axes` instance, not array. 2. If `kind=scatter` or `kind=hexbin` is specified with `subplots=True`, additional blank axes is drawn.
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6,952
BUG: _apply_empty_result should take function args
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2014-04-24T13:12:40Z
2014-04-24T16:10:54Z
2014-04-24T16:10:54Z
CONTRIBUTOR
null
See https://github.com/pydata/pandas/issues/4196#issuecomment-41275055
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6,953
BUG: Pass args and kwargs to empty
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6
2014-04-24T14:11:52Z
2017-04-05T02:08:47Z
2014-04-24T16:10:54Z
CONTRIBUTOR
null
Closes #6952 I wasn't sure what the best way to test this was. I went with calling `_apply_empty_result` directly and checking for a SystemExit to get around the try: except Exception block in `_apply_empty_result`. I still don't think I've 100% ensured that `_apply_empty_result` will always be _called with_ _args an...
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32,155,153
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6,954
BUG: Bug in sum/mean on 32-bit platforms on overflows (GH6915)
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2014-04-24T14:49:48Z
2014-07-16T09:03:00Z
2014-04-24T22:43:18Z
CONTRIBUTOR
null
closes #6915 overflow when doing sum (and mean) using bottleneck/numpy on 32-bit platforms with 32-bit dtypes
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ENH: Quantiles accepts an array
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2014-04-24T15:13:23Z
2014-07-16T09:03:02Z
2014-04-25T11:55:06Z
CONTRIBUTOR
null
Doesn't quite finish #4196, but it should be easy not that `quantile` takes arrays. I did this on top of #6953, so that should go in first.
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BUG: fix handling of color argument for variety of plotting functions
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2014-04-24T15:52:32Z
2014-06-21T08:53:32Z
2014-05-05T23:12:09Z
CONTRIBUTOR
null
parallel_coordinates - fix reordering of class column (from set) causing possible color/class mismatch - deprecated use of argument colors in favor of color radviz - fix reordering of class column (from set) causing possible color/class mismatch - added explicit color keyword argument (avoids multiple values 'colo...
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6,957
BUG: Sum() of dataframe returns string, behavior differs between mixed-type and single-type columns
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3
2014-04-24T16:12:05Z
2016-08-05T10:00:20Z
2014-04-24T16:21:58Z
CONTRIBUTOR
null
## INPUT ## Reproduce the Error ``` python import pandas as pd pd.show_versions() print "\nCASE 1 : Working with a dataframe with mixed object types ************" dfa = pd.DataFrame(data=zip(["Silly","Thing","To","Concatenate"],[0.,1.,2.,3.1]),columns=['A','B']) print " FAILS : sums the number, but returns it as a ...
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6,958
MAINT: Numpy deprecated boolean unary '-' operator
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2014-04-24T18:06:43Z
2014-06-18T02:07:24Z
2014-04-25T00:46:38Z
CONTRIBUTOR
null
I'm sure there are more of these, but I just caught this one when I was raising on all warnings.
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32,198,029
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6,959
Panel.shift does not respect dtypes 13.1
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2014-04-25T00:28:46Z
2014-04-28T23:21:23Z
2014-04-28T23:21:23Z
CONTRIBUTOR
null
Because the 13.1 shift uses `.values`, it will upcast mixed dtypes to object. ``` python import pandas as pd import numpy as np import pandas.util.testing as tm data = [('item '+ch, tm.makeMixedDataFrame()) for ch in list('abcde')] data = dict(data) mixed_panel = pd.Panel.from_dict(data, orient='minor') shifted = m...
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6,960
COMPAT: fix numpy 1.9-dev deprecation warnings in test suite
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2014-04-25T00:43:53Z
2014-06-17T08:26:48Z
2014-04-27T17:47:19Z
CONTRIBUTOR
null
COMPAT: change neg of boolean to inv (deprecation in numpy 1.9) COMPAT: remove deprecation warnings on **new** (in computation/pytables) COMPAT: fix array_to_datetime on invalid comparison to NaT related #6958 add ability to set an environmental variable to actually show the DeprecationWarnings just `setenv PANDAS_...
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32,201,829
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6,961
years-only in date_range uses current date
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11
2014-04-25T02:25:25Z
2014-10-30T11:19:43Z
2014-10-29T11:39:26Z
CONTRIBUTOR
null
I ran this on master current as of 2014-04-20 or so and was surprised as to the result: ``` python In [17]: pd.date_range('2014', '2015', freq='M') Out[17]: <class 'pandas.tseries.index.DatetimeIndex'> [2014-04-30, ..., 2015-03-31] Length: 12, Freq: M, Timezone: None ``` I would have expected that to give me the mon...
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6,962
Feature: implement Bokeh dataframe plotability
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2014-04-25T05:00:09Z
2017-10-04T15:51:59Z
2017-10-04T15:51:59Z
CONTRIBUTOR
null
[Bokeh](http://bokeh.pydata.org) specializes on large data, and is using pandas in some of their examples (e.g. [here](https://github.com/ContinuumIO/bokeh/blob/master/examples/plotting/file/glucose.py)). As pandas is built to work with large data-sets as well, I believe they would make an excellent couple! However, I...
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BUG: concat on axis with both different and duplicate labels raising error
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2014-04-25T11:30:38Z
2020-12-24T15:08:03Z
2020-12-24T15:08:03Z
MEMBER
null
When concatting two dataframes where there are a) there are duplicate columns in one of the dataframes, and b) there are non-overlapping column names in both, then you get a IndexError: ``` In [9]: df1 = pd.DataFrame(np.random.randn(3,3), columns=['A', 'A', 'B1']) ...: df2 = pd.DataFrame(np.random.randn(3,3), colum...
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6,964
Adjust Bool evaluation for empty DataFrames to match PEP8
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2014-04-25T11:31:16Z
2014-04-29T13:47:59Z
2014-04-29T12:23:07Z
NONE
null
Right now, as per the gotchas section, pandas raises a value error on an empty frame http://pandas.pydata.org/pandas-docs/dev/gotchas.html#gotchas-truth While documentation describes ambiguity, in the python world there is none. PEP8 (http://legacy.python.org/dev/peps/pep-0008/) recommends: "For sequences, (strings, l...
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BUG: DataFrame.quantile fails on datetime values
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2
2014-04-25T11:57:01Z
2014-05-10T21:51:19Z
2014-05-10T21:51:19Z
CONTRIBUTOR
null
``` python In [2]: df = DataFrame({'a': pd.to_datetime(['2010', '2011']), 'b': [0, 5]}) In [3]: df.quantile(.5, numeric_only=False) Out[3]: a 1.278072e+18 b 1.278072e+18 dtype: float64 ``` Series handles things fine. We need to do a `view('i8')` on the date time array somewhere, but I had trouble just stickin...
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6,966
BUG: clip_lower/-upper don't accept a sequence starting from 0.12.0
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3
2014-04-25T14:15:57Z
2015-04-28T11:56:04Z
2015-04-28T11:56:04Z
CONTRIBUTOR
null
Here's what I mean: ``` python In [4]: pd.Series(np.arange(7)) Out[4]: 0 0 1 1 2 2 3 3 4 4 5 5 6 6 dtype: int64 # Let's put some limit on weekends In [5]: _4.clip_upper([3,3,3,3,3, 4,4]) --------------------------------------------------------------------------- ValueError ...
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6,967
BLD: fix remaining numpy deprecations (in 1.9-dev) in test suite
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2014-04-25T14:37:40Z
2014-04-28T00:39:31Z
2014-04-28T00:39:31Z
CONTRIBUTOR
null
https://travis-ci.org/jreback/pandas/jobs/23758981 #6960 got most of the inv/neg ones (e.g. you can no longer user `-` to invert a boolean mask but must use `~`), starting in 1.9
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6,968
ENH: Support dateutil timezones. GH4688.
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46
2014-04-25T14:49:32Z
2014-06-12T18:09:13Z
2014-06-04T12:46:42Z
CONTRIBUTOR
null
closes #4688 This PR should provide support for dateutil timezones. It was discussed quite a bit in https://github.com/pydata/pandas/pull/4689. The discussion there ended two months back with "we should incorporate this if it can be made seamless". I think I've managed that now so it would be great to get some feedba...
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6,969
boxplot with by parameter draws over multiple axes
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2014-04-25T19:29:00Z
2014-04-25T19:36:00Z
2014-04-25T19:36:00Z
MEMBER
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http://stackoverflow.com/q/23301072/564538
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Cannot subset
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2
2014-04-25T19:32:29Z
2014-08-19T17:09:14Z
2014-08-19T17:09:14Z
NONE
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from SO: http://stackoverflow.com/q/23301072/564538 I'm trying to print three pandas boxplots next to each other in iPython Notebook. The dataframes each look basically like this: ``` python sub cond accuracy s1 A 0.814868 s2 A 0.504574 s3 A 0.438314 s4 A 0.956235 s5 A ...
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6,971
BUG: Skipfooter disables decimal parameter
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12
2014-04-26T12:29:18Z
2016-07-26T22:44:17Z
2016-07-26T22:44:16Z
NONE
null
I ran into a bug in the read_csv importer when trying to read in a file with a European style decimal encoding (e.g. 8.1 -> 8,2). Setting the decimal-parameter appropriately should make this easy but in my case pandas refused to accepts any different data type than a simple object. After a few attempts with various fi...
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6,972
Cookbook additions
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2
2014-04-26T13:34:43Z
2014-06-13T16:46:14Z
2014-04-27T13:58:57Z
CONTRIBUTOR
null
As suggested by Jeff on this [StackOverflow answer](http://stackoverflow.com/a/23233196/1222578), I'm adding an example of a boxplot that uses quartiles of a second variable as the `by` variable. Jeff also suggested adding the example in-line, rather than just providing a link to StackOverflow, so that's what I've don...
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6,973
Module-level "max" and "min"
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2014-04-26T14:32:16Z
2014-04-27T13:57:16Z
2014-04-27T13:56:06Z
MEMBER
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Assume that I want to take the row-wise maximum of two Series **A** and **B**. As far as I understand, I have two choices: 1) ``` result = pandas.DataFrame({'A' : A, 'B' : B}).max(axis=1) ``` 2) ``` result = pandas.Series(numpy.max((A, B), axis=0), index=A.index) ``` (assuming A and B have identical, and sorted, i...
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6,974
Panel shift revert
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2014-04-26T19:50:48Z
2014-06-18T12:23:39Z
2014-04-28T23:21:23Z
CONTRIBUTOR
null
Reverts #6605 closes #6959 #6826 ## vs 13.1 ``` ------------------------------------------------------------------------------- Test name | head[ms] | base[ms] | ratio | ------------------------------------------------------------------------------- panel_shift ...
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Fix for GH 6885 - get_dummies chokes on unicode values
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2014-04-26T22:55:12Z
2014-06-20T23:25:14Z
2014-04-30T12:40:10Z
CONTRIBUTOR
null
closes #6885 Please be gentle - this is the first time I've tried to contribute either to someone else's python project or another project on github, so if my python or git foo is lacking, I apologise in advance!
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6,976
ENH: support pie plot in series and dataframe plot
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12
2014-04-27T00:22:28Z
2014-06-12T21:10:18Z
2014-05-05T16:15:22Z
MEMBER
null
Related to #413, added pie plot for `Series.plot` and `DataFrame.plot` kind. If data includes `NaN`, it will be automatically filled by 0. If data contains negative value, `ValueError` will be raised. ``` import pandas as pd import numpy as np series = pd.Series(3 * np.random.rand(4), index=['a', 'b', 'c', 'd'], name...
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ERR: Add check for iterators when creating DataFrame, fixes #5357
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2014-04-27T02:18:18Z
2014-07-16T09:03:26Z
2014-04-27T23:39:52Z
CONTRIBUTOR
null
This is a fix for #5357, and adds a more helpful error message when trying to use an iterator as the `data` argument for a `DataFrame`. I've added the type check for iterators in the final else clause where all the valid options have already been exhausted, so it shouldn't interfere with any valid cases like passing a ...
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6,978
SeriesGroupBy and DataFrameGroupBy are missing mode() function
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7
2014-04-27T06:04:11Z
2020-01-29T12:37:48Z
2014-04-27T08:18:17Z
NONE
null
The mode() function is missing from SeriesGroupBy and DataFrameGroupBy. It should be implemented with the same semanthics as as mean(), median(), max(), etc.
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6,979
mode() function returns wrong answer when most common element occurs once
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2014-04-27T06:18:12Z
2014-04-27T08:19:07Z
2014-04-27T07:12:54Z
NONE
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Consider the following code: ``` pd.Series([1]).mode() => Series([], dtype: int64) ``` Expected value is the same as for: ``` pd.Series([1,1]).mode() => 0 1 => dtype: int64 ``` The same problem happens whenever the most common element only occurs once: ``` pd.Series(range(100)).mode() Series([], dtype: int64) `...
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6,980
COMPAT: fix PyTables 3.0.0 deprecation warnings in HDFStore
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2014-04-27T13:44:51Z
2014-09-19T20:20:24Z
2014-09-19T20:20:24Z
CONTRIBUTOR
null
PyTables 3.0.0 deprecations every function as they weren't PEP compitable. So need to change all call references. Deprecation warnings are currnetly turned off by this commit otherwise output is very long (when `PANDAS_TESTING_MODE='deprecate'` is turned on (in numpy-1.9/3.4 builds) https://github.com/pydata/pandas/co...
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6,981
COMPAT: windows dtype fix in for Panel.count
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2014-04-27T16:09:21Z
2014-07-22T18:40:54Z
2014-04-27T16:09:32Z
CONTRIBUTOR
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6,982
Random bad asserts for stat ops when running tests.
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2014-04-27T16:12:57Z
2014-05-02T17:13:04Z
2014-04-27T22:16:48Z
CONTRIBUTOR
null
``` ====================================================================== FAIL: test_sum (pandas.tests.test_frame.TestDataFrame) ---------------------------------------------------------------------- Traceback (most recent call last): File "/home/travis/virtualenv/python2.6_with_system_site_packages/lib/python2.6/si...
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6,983
PERF: improved performance of compatible pickles (GH6899)
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2014-04-27T16:31:13Z
2014-06-30T18:09:34Z
2014-04-27T22:15:44Z
CONTRIBUTOR
null
closes #6899 though seems that cPickle can on a small file/dataset be slower so waiting for results on #6899 tests
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COMPAT: remove pandas line_width/height deprecations from test suite
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2014-04-27T17:46:48Z
2014-04-27T21:53:08Z
2014-04-27T21:38:28Z
CONTRIBUTOR
null
https://travis-ci.org/jreback/pandas/jobs/23875619 if deprecations mode is turned on #6960 then these become apparant I think the tests simply need to be change and/or asserted that these are actually producing deprecation warnings
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TST: test_frame/test_sum not comparing correctly on smaller sized dtypes (GH6982)
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0
2014-04-27T19:02:09Z
2014-07-16T09:03:32Z
2014-04-27T22:16:48Z
CONTRIBUTOR
null
closes #6982
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6,986
COMPAT: remove deprecated optinos from printing in test suite (GH6984)
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1
2014-04-27T20:26:29Z
2014-07-16T09:03:34Z
2014-04-27T21:38:28Z
CONTRIBUTOR
null
closes #6984
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6,987
SQL: bunch of fixes based on the old tests
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20
2014-04-27T21:53:08Z
2014-06-12T12:52:48Z
2014-05-08T12:26:22Z
MEMBER
null
Some first fixes based on running the old sql tests (from 0.13.1 tag) - fixed `get_schema` (and adapted is signature back to how it was for 0.13.1). For this I added back the old function, as this functionality was not possible with the refactored class based approach (for those you always have to provide a connection ...
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6,988
CLN: drop internals._invert_reordering in favour of lib.get_reverse_indexer
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7
2014-04-28T09:24:28Z
2014-06-25T22:25:34Z
2014-04-28T11:20:38Z
CONTRIBUTOR
null
I've implemented the former while refactoring BlockManager (#6745) because I didn't find the latter in lib module. This PR will remove the duplication (and also add missing changelog entry).
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DOC: fix some doc build warnings
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2014-04-28T11:24:07Z
2014-07-16T09:03:46Z
2014-04-28T11:58:53Z
MEMBER
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6,990
TST: fix checking for less_precise in floats
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0
2014-04-28T11:59:07Z
2014-07-16T09:03:47Z
2014-04-28T12:44:00Z
CONTRIBUTOR
null
really close #6982
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6,991
BUG: df.boxplot fails to use existing axis/subplot (#3578)
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11
2014-04-28T12:52:51Z
2014-06-25T17:29:12Z
2014-05-08T13:21:04Z
CONTRIBUTOR
null
Alright, I think I have a fix for issue #3578. In `plotting._grouped_plot_by_column`, there was no check being done for whether `ax` was `None`, which was the main source of the issue. When the boxplot is of multiple columns, I don't think there's anything sensible that can be done with the `ax` argument, so that now r...
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6,992
BUG: Groupby NaT Handling
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6
2014-04-28T12:59:16Z
2015-06-02T19:25:19Z
2015-05-30T13:05:57Z
MEMBER
null
xref #9236 There seems to be an inconsistency in some GroupBy methods when `NaT` is included in the group key. - `GroupBy.groups` includes `NaT` as a key. - `GroupBy.ngroups` doesn't count `NaT`. - `GroupBy.__iter__` doesn't return `NaT` group. - `GroupBy.get_group` fails when `NaT` is specified. I understand `NaT` ...
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DOC: add matplotlib links for plot functions
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2
2014-04-28T14:12:23Z
2014-04-28T14:40:08Z
2014-04-28T14:40:08Z
CONTRIBUTOR
null
after this is merged, can prob add in the Notes section of plotting function sto see matplotlib https://github.com/pydata/pandas/pull/6976
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DOC: Reorganize plotting.rst
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5
2014-04-28T14:16:27Z
2014-05-05T19:52:08Z
2014-05-05T19:52:08Z
CONTRIBUTOR
null
With the recent additions of hexbin, area, table, and pie charts (I may be forgetting some), the visualization docs are getting a bit long. I'll reorganize things to hopefully be a bit clearer. I'll also mention things like seaborn, ggplot, mpld3, vincent, bearcart, and maybe remove the note that we plan to add more i...
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6,995
PERF: pct_change perf / cleanup up NDFrame.slice_Shift
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0
2014-04-28T23:24:08Z
2018-07-06T22:39:32Z
2018-07-06T22:39:32Z
CONTRIBUTOR
null
see #6974 for Panel - like to remove `NDFrame.slice_shift` and roll it into the Block itself as a bit cleaner - see if can fix `pct_change` perf as its doing a `isnull` on by slice; maybe can just do that once then slice the mask
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6,996
BUG: GroupBy.get_group raises ValueError when group key contains NaT
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35
2014-04-28T23:44:28Z
2015-06-02T19:26:59Z
2015-05-30T13:05:57Z
MEMBER
null
Closes #6992. Made `GroupBy.get_group` works even if the key contains `NaT`. NOTE: One issue is that `GroupBy.groups` returns incorrect key in numpy 1.6. This seems to be caused by `_convert_grouper` uses `grouper.reindex(axis).values` to return value. This looks doesn't affect to main functionalities, but is there a...
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6,997
make grouping column an agg
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1
2014-04-29T00:19:34Z
2014-07-17T17:02:27Z
2014-04-29T15:32:00Z
CONTRIBUTOR
null
fixes #5610
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6,998
Add datetimeindex accessors to timeseries documentation (timeseries.rst)
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1
2014-04-29T04:18:28Z
2014-04-30T00:21:58Z
2014-04-30T00:21:58Z
CONTRIBUTOR
null
All of the timestamp/datetimeindex accessors are not in the timeseries documentation (they currently are only referenced in the api documentation). It would be great to have a section on these accessors: .year .month .day .hour .minute .second .microsecond .nanosecond .date .time .dayofyear .weekofyear ....
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6,999
ENH: Implement core/strings/wrap method
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3
2014-04-29T14:52:17Z
2014-06-25T22:25:38Z
2014-04-29T21:04:04Z
CONTRIBUTOR
null
This patch implements the str.wrap function within core/strings. Example: ``` >>> s = pd.Series(['line to be wrapped', 'another line to be wrapped']) >>> s.str.wrap(12) 0 line to be\nwrapped 1 another line\nto be\nwrapped ``` This is a cleaned branch; the original is at #6705.
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ENH/BUG: add count to grouper / ensure that grouper keys are not included in the returned
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2014-04-29T15:30:07Z
2014-06-15T01:48:09Z
2014-04-29T20:12:46Z
CONTRIBUTOR
null
closes #5610
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