prompt large_stringlengths 72 9.34k | completion large_stringlengths 0 7.61k |
|---|---|
<|file_name|>rule_008.py<|end_file_name|><｜fim▁begin｜>
from vsg.rules import token_prefix
from vsg import token
lTokens = []
lTokens.append(token.signal_declaration.identifier)
class rule_008(token_prefix):
<|fim_middle|>
<｜fim▁end｜> | '''
This rule checks for valid prefixes on signal identifiers.
Default signal prefix is *s\_*.
|configuring_prefix_and_suffix_rules_link|
**Violation**
.. code-block:: vhdl
signal wr_en : std_logic;
signal rd_en : std_logic;
**Fix**
.. code-block:: vhdl
signal... |
<|file_name|>rule_008.py<|end_file_name|><｜fim▁begin｜>
from vsg.rules import token_prefix
from vsg import token
lTokens = []
lTokens.append(token.signal_declaration.identifier)
class rule_008(token_prefix):
'''
This rule checks for valid prefixes on signal identifiers.
Default signal prefix is *s\_*.
... | token_prefix.__init__(self, 'signal', '008', lTokens)
self.prefixes = ['s_']
self.solution = 'Signal identifiers' |
<|file_name|>rule_008.py<|end_file_name|><｜fim▁begin｜>
from vsg.rules import token_prefix
from vsg import token
lTokens = []
lTokens.append(token.signal_declaration.identifier)
class rule_008(token_prefix):
'''
This rule checks for valid prefixes on signal identifiers.
Default signal prefix is *s\_*.
... | __init__ |
<|file_name|>euler_17.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/python -Wall
# -*- coding: utf-8 -*-
"""
<div id="content">
<div style="text-align:center;" class="print"><img src="images/print_page_logo.png" alt="projecteuler.net" style="border:none;" /></div>
<h2>Number letter counts</h2><div id="problem_info" class=... | |
<|file_name|>euler_17.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/python -Wall
# -*- coding: utf-8 -*-
"""
<div id="content">
<div style="text-align:center;" class="print"><img src="images/print_page_logo.png" alt="projecteuler.net" style="border:none;" /></div>
<h2>Number letter counts</h2><div id="problem_info" class=... | if(i<100):
s[i]=s[i/10*10]+s[i%10]
else:
s[i]=s[i/100]+"hundred"
if(i%100):
s[i]+="and"+s[i%100] |
<|file_name|>euler_17.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/python -Wall
# -*- coding: utf-8 -*-
"""
<div id="content">
<div style="text-align:center;" class="print"><img src="images/print_page_logo.png" alt="projecteuler.net" style="border:none;" /></div>
<h2>Number letter counts</h2><div id="problem_info" class=... | s[i]=s[i/10*10]+s[i%10] |
<|file_name|>euler_17.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/python -Wall
# -*- coding: utf-8 -*-
"""
<div id="content">
<div style="text-align:center;" class="print"><img src="images/print_page_logo.png" alt="projecteuler.net" style="border:none;" /></div>
<h2>Number letter counts</h2><div id="problem_info" class=... | s[i]=s[i/100]+"hundred"
if(i%100):
s[i]+="and"+s[i%100] |
<|file_name|>euler_17.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/python -Wall
# -*- coding: utf-8 -*-
"""
<div id="content">
<div style="text-align:center;" class="print"><img src="images/print_page_logo.png" alt="projecteuler.net" style="border:none;" /></div>
<h2>Number letter counts</h2><div id="problem_info" class=... | s[i]+="and"+s[i%100] |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
<|fim_middle|>
if __name__ == "__main__":
unittest.main()
<｜fim▁end｜> | def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# https://en.wikipedia.org/wiki/Algorithm
# a, b, expected
self.test_data = ((12, 8, 4),
(9, 12, 3),
(54, 24, 6),
(... |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | self.test_data = ((12, 8, 4),
(9, 12, 3),
(54, 24, 6),
(3009, 884, 17),
(40902, 24140, 34),
(14157, 5950, 1)
) |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | actual = gcd.GreatestCommonDivisor.greatest_common_divisor(12, 0)
self.assertEqual(0, actual)
actual = gcd.GreatestCommonDivisor.greatest_common_divisor(0, 13)
self.assertEqual(0, actual)
actual = gcd.GreatestCommonDivisor.greatest_common_divisor(-5, 13)
self.assertEqual(... |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | for test_case in self.test_data:
expected = test_case[2]
actual = gcd.GreatestCommonDivisor.greatest_common_divisor(test_case[0], test_case[1])
fail_message = str.format("expected {0} but got {1}", expected, actual)
self.assertEqual(expected, actual, fail_message) |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | actual = gcd.GreatestCommonDivisor.next_smaller_divisor(8, 8)
self.assertEqual(4, actual)
actual = gcd.GreatestCommonDivisor.next_smaller_divisor(12, 12)
self.assertEqual(6, actual)
actual = gcd.GreatestCommonDivisor.next_smaller_divisor(12, 6)
self.assertEqual(4, actual)... |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | unittest.main() |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def <|fim_middle|>(self):
# use tuple of tuples instead of list of tuples because data won't change
... | setUp |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | test_greatest_common_divisor_zero |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | test_greatest_common_divisor |
<|file_name|>test_greatest_common_divisor.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python3
import unittest
import greatest_common_divisor as gcd
class TestGreatestCommonDivisor(unittest.TestCase):
def setUp(self):
# use tuple of tuples instead of list of tuples because data won't change
# ... | test_next_smaller_divisor |
<|file_name|>urls.py<|end_file_name|><｜fim▁begin｜>from django.conf.urls import url
from admin.nodes import views
app_name = 'admin'
urlpatterns = [
url(r'^$', views.NodeFormView.as_view(),
name='search'),
url(r'^flagged_spam$', views.NodeFlaggedSpamList.as_view(),
name='flagged-spam'),
url... | name='node'),
url(r'^(?P<guid>[a-z0-9]+)/logs/$', views.AdminNodeLogView.as_view(),
name='node-logs'), |
<|file_name|>shtest-format.py<|end_file_name|><｜fim▁begin｜># Check the various features of the ShTest format.
#
# RUN: not %{lit} -j 1 -v %{inputs}/shtest-format > %t.out
# RUN: FileCheck < %t.out %s
#
# END.
# CHECK: -- Testing:
# CHECK: FAIL: shtest-format :: external_shell/fail.txt
# CHECK: *** TEST 'shtest-format... | # CHECK: Unexpected Passes : 1
# CHECK: Unexpected Failures: 2 |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | self.pub_client = pubsub.PublisherClient() |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | def setUp(self):
self.test_pipeline = TestPipeline(is_integration_test=True)
self.project = self.test_pipeline.get_option('project')
self.uuid = str(uuid.uuid4())
# Set up PubSub environment.
from google.cloud import pubsub
self.pub_client = pubsub.PublisherClient()
self.input_topic = sel... |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | self.test_pipeline = TestPipeline(is_integration_test=True)
self.project = self.test_pipeline.get_option('project')
self.uuid = str(uuid.uuid4())
# Set up PubSub environment.
from google.cloud import pubsub
self.pub_client = pubsub.PublisherClient()
self.input_topic = self.pub_client.create... |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | """Inject numbers as test data to PubSub."""
logging.debug('Injecting %d numbers to topic %s', num_messages, topic.name)
for n in range(num_messages):
self.pub_client.publish(self.input_topic.name, str(n).encode('utf-8')) |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | test_utils.cleanup_subscriptions(self.sub_client,
[self.input_sub, self.output_sub])
test_utils.cleanup_topics(self.pub_client,
[self.input_topic, self.output_topic]) |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | expected_msg = [('%d: 1' % num).encode('utf-8')
for num in range(DEFAULT_INPUT_NUMBERS)]
# Set extra options to the pipeline for test purpose
state_verifier = PipelineStateMatcher(PipelineState.RUNNING)
pubsub_msg_verifier = PubSubMessageMatcher(self.project,
... |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | logging.getLogger().setLevel(logging.DEBUG)
unittest.main() |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | setUp |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | _inject_numbers |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | tearDown |
<|file_name|>streaming_wordcount_it_test.py<|end_file_name|><｜fim▁begin｜>#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to Yo... | test_streaming_wordcount_it |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | with outfile:
model_writer = RobotModelWriter(outfile, self._js_model, config)
writer = HtmlFileWriter(outfile, model_writer)
writer.write(template) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | def __init__(self, js_model):
self._js_model = js_model
def _write_file(self, path, config, template):
outfile = codecs.open(path, 'wb', encoding='UTF-8')\
if isinstance(path, basestring) else path # unit test hook
with outfile:
model_writer = RobotModelWriter(o... |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | self._js_model = js_model |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | outfile = codecs.open(path, 'wb', encoding='UTF-8')\
if isinstance(path, basestring) else path # unit test hook
with outfile:
model_writer = RobotModelWriter(outfile, self._js_model, config)
writer = HtmlFileWriter(outfile, model_writer)
writer.write(temp... |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | def __init__(self, output, model, config):
self._output = output
self._model = model
self._config = config
def write(self, line):
JsResultWriter(self._output).write(self._model, self._config) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | self._output = output
self._model = model
self._config = config |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | JsResultWriter(self._output).write(self._model, self._config) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | def write(self, path, config):
self._write_file(path, config, LOG)
if self._js_model.split_results:
self._write_split_logs(splitext(path)[0])
def _write_split_logs(self, base):
for index, (keywords, strings) in enumerate(self._js_model.split_results):
index += 1 ... |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | self._write_file(path, config, LOG)
if self._js_model.split_results:
self._write_split_logs(splitext(path)[0]) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | for index, (keywords, strings) in enumerate(self._js_model.split_results):
index += 1 # enumerate accepts start index only in Py 2.6+
self._write_split_log(index, keywords, strings, '%s-%d.js' % (base, index)) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | with utf8open(path, 'wb') as outfile:
writer = SplitLogWriter(outfile)
writer.write(keywords, strings, index, basename(path)) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | def write(self, path, config):
self._write_file(path, config, REPORT) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | self._write_file(path, config, REPORT) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | self._write_split_logs(splitext(path)[0]) |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | __init__ |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | _write_file |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | __init__ |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | write |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | write |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | _write_split_logs |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | _write_split_log |
<|file_name|>logreportwriters.py<|end_file_name|><｜fim▁begin｜># Copyright 2008-2012 Nokia Siemens Networks Oyj
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.o... | write |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse<｜fim▁hole｜>
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
selector = bridge.Select_AtomGroup(selected_... | import pprint
import proteindf_bridge as bridge |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
<|fim_... | selector = bridge.Select_AtomGroup(selected_molecule)
selected = frame_molecule.select(selector)
rest_molecule = frame_molecule ^ selected
return rest_molecule |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | chain = bridge.AtomGroup()
res = bridge.AtomGroup()
res.name = res_name
atom_id = 1
for atom in rest_molecule.get_atom_list():
res.set_atom(atom_id, atom)
atom_id += 1
chain.set_group(1, res)
output_atom_group[model_id].set_group(chain_id, chain) |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | parser = argparse.ArgumentParser(
description='restructure brd file by reference file')
parser.add_argument('target_brd_path',
nargs=1,
help='target brd file')
parser.add_argument('ref_brd_path',
nargs=1,
... |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | print("target: {}".format(target_brd_path))
print("reference: {}".format(ref_brd_path)) |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | if verbose:
print("output brd file: {}".format(output_path))
bridge.save_atomgroup(restructured, output_path) |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | print("output brd file: {}".format(output_path)) |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | main()
# pr.disable()
# pr.dump_stats('program.profile') |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def <|fim_middle|>(frame_molecule, selected_molecule):
# calc the rest
selector = bridge.... | get_rest_of_frame_molecule |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | assign_rest_molecule |
<|file_name|>brd-restructure.py<|end_file_name|><｜fim▁begin｜>#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import pprint
import proteindf_bridge as bridge
import logging
import logging.config
def get_rest_of_frame_molecule(frame_molecule, selected_molecule):
# calc the rest
select... | main |
<|file_name|>setup.py<|end_file_name|><｜fim▁begin｜># -*- coding: utf-8 -*-
#
#
# TheVirtualBrain-Framework Package. This package holds all Data Management, and
# Web-UI helpful to run brain-simulations. To use it, you also need do download
# TheVirtualBrain-Scientific Package (for simulators). See content of the
# doc... | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public
# License for more details. You should have received a copy of the GNU General
# Public License along with this program; if not, you can download it here |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
... | drawing.text((63, PADDING_TOP+1), '%s%%' % percentage, font=FONT, fill=FONT_SHADOW) |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
<|fim_middle|>
BACKGROUND = hex_colour('#4A4A4A')
SUCCESS = hex_colour('#94B9... | if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
int(hex[2:4], 16),
int(hex[4:6], 16),
) |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
... | image = Image.new('RGB', SIZE, color=BACKGROUND)
drawing = ImageDraw.Draw(image)
drawing.rectangle([(55, 0), SIZE], colour, colour)
drawing.text((8, PADDING_TOP+1), 'coverage', font=FONT, fill=FONT_SHADOW)
drawing.text((7, PADDING_TOP), 'coverage', font=FONT)
drawing.text((63, PADDING_... |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
<|fim_middle|>
return (
int(hex[... | hex = hex[1:] |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
... | build_image(i, ERROR).save(file) |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
... | build_image(i, WARNING).save(file) |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
... | build_image(i, SUCCESS).save(file) |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def <|fim_middle|>(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 1... | hex_colour |
<|file_name|>badge_maker.py<|end_file_name|><｜fim▁begin｜>"""
Drone.io badge generator.
Currently set up to work on Mac.
Requires Pillow.
"""
import os
from PIL import Image, ImageDraw, ImageFont
SIZE = (95, 18)
def hex_colour(hex):
if hex[0] == '#':
hex = hex[1:]
return (
int(hex[:2], 16),
... | build_image |
<|file_name|>_showexponent.py<|end_file_name|><｜fim▁begin｜>import _plotly_utils.basevalidators<｜fim▁hole｜>
class ShowexponentValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self,
plotly_name="showexponent",
parent_name="scatterpolar.marker.colorbar",
**kwar... | |
<|file_name|>_showexponent.py<|end_file_name|><｜fim▁begin｜>import _plotly_utils.basevalidators
class ShowexponentValidator(_plotly_utils.basevalidators.EnumeratedValidator):
<|fim_middle|>
<｜fim▁end｜> | def __init__(
self,
plotly_name="showexponent",
parent_name="scatterpolar.marker.colorbar",
**kwargs
):
super(ShowexponentValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
edit_type=kwargs.pop("edit_type", "co... |
<|file_name|>_showexponent.py<|end_file_name|><｜fim▁begin｜>import _plotly_utils.basevalidators
class ShowexponentValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def __init__(
self,
plotly_name="showexponent",
parent_name="scatterpolar.marker.colorbar",
**kwargs
):
... | super(ShowexponentValidator, self).__init__(
plotly_name=plotly_name,
parent_name=parent_name,
edit_type=kwargs.pop("edit_type", "colorbars"),
values=kwargs.pop("values", ["all", "first", "last", "none"]),
**kwargs
) |
<|file_name|>_showexponent.py<|end_file_name|><｜fim▁begin｜>import _plotly_utils.basevalidators
class ShowexponentValidator(_plotly_utils.basevalidators.EnumeratedValidator):
def <|fim_middle|>(
self,
plotly_name="showexponent",
parent_name="scatterpolar.marker.colorbar",
**kwargs
... | __init__ |
<|file_name|>__init__.py<|end_file_name|><｜fim▁begin｜># -*- coding: utf-8 -*-
# © 2014 Elico Corp (https://www.elico-corp.com)
# Licence AGPL-3.0 or later(http://www.gnu.org/licenses/agpl.html)
<｜fim▁hole｜><｜fim▁end｜> | import invoice |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | # Author: Andrew Milton <akm@theinternet.com.au>
# $Id: Plugins.py,v 1.5 2004/11/10 14:15:33 akm Exp $
import App, Globals, OFS |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | def __init__(self, name, description, pluginClass,
pluginStartForm, pluginStartMethod,
pluginEditForm=None, pluginEditMethod=None):
self.name=name #No Spaces please...
self.description=description
self.plugin=pluginClass
self.manage_addForm=pluginStartForm
self.manage_addMethod=pluginStartMethod
... |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | self.name=name #No Spaces please...
self.description=description
self.plugin=pluginClass
self.manage_addForm=pluginStartForm
self.manage_addMethod=pluginStartMethod
self.manage_editForm=pluginEditForm
self.manage_editMethod=pluginEditMethod |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | def __init__(self, name, crypto, description, pluginMethod):
self.name = name #No Spaces please...
self.cryptoMethod = crypto
self.description = description
self.plugin = pluginMethod |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | self.name = name #No Spaces please...
self.cryptoMethod = crypto
self.description = description
self.plugin = pluginMethod |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | __init__ |
<|file_name|>Plugins.py<|end_file_name|><｜fim▁begin｜>#
#
# (C) Copyright 2001 The Internet (Aust) Pty Ltd
# ACN: 082 081 472 ABN: 83 082 081 472
# All Rights Reserved
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMP... | __init__ |
<|file_name|>test_demos_desordre.py<|end_file_name|><｜fim▁begin｜># -*- encoding: utf-8 -*-
import os
from abjad import abjad_configuration
from abjad.demos import desordre
<｜fim▁hole｜> lilypond_file = desordre.make_desordre_lilypond_file()<｜fim▁end｜> | def test_demos_desordre_01():
|
<|file_name|>test_demos_desordre.py<|end_file_name|><｜fim▁begin｜># -*- encoding: utf-8 -*-
import os
from abjad import abjad_configuration
from abjad.demos import desordre
def test_demos_desordre_01():
<|fim_middle|>
<｜fim▁end｜> | lilypond_file = desordre.make_desordre_lilypond_file() |
<|file_name|>test_demos_desordre.py<|end_file_name|><｜fim▁begin｜># -*- encoding: utf-8 -*-
import os
from abjad import abjad_configuration
from abjad.demos import desordre
def <|fim_middle|>():
lilypond_file = desordre.make_desordre_lilypond_file()<｜fim▁end｜> | test_demos_desordre_01 |
<|file_name|>01-document.py<|end_file_name|><｜fim▁begin｜>import os, sys; sys.path.insert(0, os.path.join(os.path.dirname(__file__), "..", ".."))
import codecs
from pattern.vector import Document, PORTER, LEMMA
# A Document is a "bag-of-words" that splits a string into words and counts them.
# A list of words or dicti... | f = os.path.join(os.path.dirname(__file__), "corpus", "wolf.txt")
s = codecs.open(f, encoding="utf-8").read()
document = Document(s, name="wolf", stemmer=PORTER)
print document |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
<|fim_middle|>
@python_2_unicode_compatible
class Element(models.Model):
name = model... | ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = models.CharField(max_length=100)
params = models.CharField(max_length=255)
def __str__(self):
return self.ip |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | return self.ip |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | name = models.CharField(max_length=10)
code = models.CharField(max_length=10)
def __str__(self):
return self.name
class Meta:
verbose_name = "ธาตุ"
verbose_name_plural = "ธาตุต่างๆ"
db_table = 'element'
@python_2_unicode_compa |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | return self.name |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | verbose_name = "ธาตุ"
verbose_name_plural = "ธาตุต่างๆ"
db_table = 'element'
@python_2_unicode_compa |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | x_length=100, unique=True)
description = models.CharField(max_length=255, null=True)
is_congenital = models.BooleanField(default=False)
created_by = models.CharField(max_length=50, null=True)
created_date = models.DateTimeField(auto_now_add=True)
last_modified = models.DateTimeField(auto_now=Tru... |
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | s Meta:
|
<|file_name|>models.py<|end_file_name|><｜fim▁begin｜>##-*-coding: utf-8 -*-
from django.db import models
from django.utils.encoding import python_2_unicode_compatible
@python_2_unicode_compatible
class Usage(models.Model):
ip = models.CharField(max_length=50)
method = models.CharField(max_length=3)
path = ... | verbose_name_plural = "กลุ่มเชื้อโรค"
db_table = 'disease'
class Nutrient(models.Model):
water = models.DecimalField(max |
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