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import time def seconds_since(t): """seconds_since returns the seconds since `t`. `t` is assumed to be a time in epoch seconds since time.time() returns the current time in epoch seconds. Args: t (int) - a time in epoch seconds Returns int: the number of seconds since `t` """ ...
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def intersect(box1, box2): """Calculate the intersection of two boxes.""" b1_x0, b1_y0, b1_x1, b1_y1 = box1 b2_x0, b2_y0, b2_x1, b2_y1 = box2 x0 = max(b1_x0, b2_x0) y0 = max(b1_y0, b2_y0) x1 = min(b1_x1, b2_x1) y1 = min(b1_y1, b2_y1) if x0 > x1 or y0 > y1: # No intersection, return No...
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def donottrack(request): """ Adds ``donottrack`` to the context, which is ``True`` if the ``HTTP_DNT`` header is ``'1'``, ``False`` otherwise. This context processor requires installtion of the ``donottrack.middleware.DoNotTrackMiddleware``. Note that use of this context processor is not stric...
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def _sort_orders(orders): """Sort a list of possible orders that are to be tried so that the simplest ones are at the beginning. """ def weight(p, d, q, P, D, Q): """Assigns a weight to a given model order which accroding to which orders are sorted. It is only a simple heuristic that mak...
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def ToGLExtensionString(extension_flag): """Returns GL-type extension string of a extension flag.""" if extension_flag == "oes_compressed_etc1_rgb8_texture": return "OES_compressed_ETC1_RGB8_texture" # Fixup inconsitency with rgb8, # unfortunate. uppercase_words =...
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def uniqued(iterable): """Return unique list of items preserving order. >>> uniqued([3, 2, 1, 3, 2, 1, 0]) [3, 2, 1, 0] """ seen = set() add = seen.add return [i for i in iterable if i not in seen and not add(i)]
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def genKgris(k): """ Calcule une liste de ``k`` teintes de gris allant du noir au blanc. Paramètre: k --> nombre de teintes (>=2) La liste génére doit nécessairement commencer par la couleur noir (0,0,0) et nécessairement terminer par la couleur blanc (255,255,255). Les autres valeurs...
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def fromRoman(r): """Return the numeric value of a valid roman numeral.""" # Handle subtractions by trying to match two characters first. # If this fails, match only one character. romanMap = dict((('M', 1000), ('CM', 900), ('D', 500), ('CD', 400), ('C', 100), ('XC', 90), ...
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import glob def summfile(ifldpth,idx): """ Find _x1dsum file ending with idx + '_x1dsum.fits' Parameters ---------- ifldpth : str path to the files idx : str the file ends with idx + '_x1dsum.fits' e.g. idx = '10' Returns ------- fname : str sum file name...
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def get_hashable_cycle(cycle): """ Cycle as a tuple in a deterministic order. Args ---- cycle: list List of node labels in cycle. """ # get index of minimum index in cycle. m = min(cycle) mi = cycle.index(m) mi_plus_1 = (mi + 1) if (mi < len(cycle) - 1) else 0 ...
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def get_susceptibility_matrix_index(age): """ The age matrix is 16x16 and it's split in groups of 4, We can use whole division to quickly get the index """ if age >= 75: return 15 else: return age // 5
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def truncate(string, length=60): """Truncate the given string when it exceeds the given length.""" return string[:length - 4] + '.' * 3 if len(string) > length else string
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from PIL import Image def pilnew_imageobject(image_file: str): """Returns a PIL image object from a referenced image file. Args: image_file (str): Reference an existing image file. Returns: PIL.Image.Image: Returns a PIL image object """ # image_object = Image.open(image_...
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def string_handler(item): """ Create a string out of an item if isn't it already. Parameters: - item: The variable to make sure it is a string. Returns: The input as a string. """ return ( str(item) if not isinstance(item, str) else item )
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import random def random_word_swap(sentence, p): """Swaps words from a sentence with probability p.""" def swap_word(new_words): idx_1 = random.randint(0, len(new_words) - 1) idx_2 = idx_1 counter = 0 while idx_2 == idx_1: idx_2 = random.randint(0, len(new_words) - 1) counter += 1 ...
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def is_array_type(rtype): """ Test to see if return type parameter is a NumPy array. :param str rtype: Return type parameter. :return: *True* if return type parameter is a NumPy array, *False* if not. :rtype: bool """ if rtype.lower() in ['ndarray', 'array', 'arr', 'np', 'a']: retu...
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def check_magnetic_atoms(in_path: str) -> list: """ Args: in_path (str) - path for the prepared to siman structure reader POSCAR type file. Returns: magnetic_atoms (list) - list of magnetic atoms in prepared structures with "fake" atoms e.g ...
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import torch from typing import Callable from typing import Iterable from typing import Tuple def make_batcher( x: torch.Tensor, y: torch.Tensor, batch_size: int ) -> Callable[[], Iterable[Tuple[torch.Tensor, torch.Tensor]]]: """Returns a function that can be called to yield batches over x and y.""" asser...
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import re def munge_subject_to_filename(subject): """Derive a suitable filename from a commit's subject""" if subject.endswith('.patch'): subject = subject[:-6] return re.sub(r'[^A-Za-z0-9-]+', '_', subject).strip('_').lower() + '.patch'
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def abstract_class(cls_): """Decorate a class, overriding __new__. Preventing a class from being instantiated similar to abc.ABCMeta but does not require an abstract method. """ def __new__(cls, *args, **kwargs): if cls is cls_: raise TypeError(f'{cls.__name__} is an abstract c...
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def is_upvoted(submission): """ If a comment is upvoted, we assume the question is welcomed, and that there's no need for a template answer. """ min_score = 3 min_comment_count = 1 return ( submission.score > min_score and len(submission.comments) > min_comment_count )
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def get_label(filename, labels=["head", "body", "arm","tail", "leg", "ear"]): """ If the filename contains the word in the list called labels, it returns a pair of name and id number. example: get_labels(./raccoon/labels/head.ply, ["head, leg"]): It will return ("head",0) get_label...
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def _get_dropbox_path_from_dictionary(info_dict, account_type): """ Returns the 'path' value under the account_type dictionary within the main dictionary """ return info_dict[account_type]['path']
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def binary_search(array, value): """Search for value in sorted array, using binary search Continually divide (sub-) array in half until value is found, or entire array has been searched. Iterative approach. Parameters array : list List to search. Must be sorted. value : any Val...
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from typing import Tuple def blend_colors( rgba: Tuple[int, int, int, float], rgb: Tuple[int, int, int] ) -> Tuple[int, int, int]: """Get the resulting RGB color of an RGBA color rendered over an RGB color.""" red = (rgba[0] * rgba[3]) + (rgb[0] * (1 - rgba[3])) blue = (rgba[1] * rgba[3]) + (rgb[1] * (1 - rgba[...
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def stripnl(s): """remove newlines from a string""" return str(s).replace("\n", " ")
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from typing import List def solution(board: List[List[int]]) -> int: """ 입력된 2차원 배열에서 가장 큰 1로 된 정사각형을 구하라 Args: board (List[List[int]]): 각각의 원소가 1이나 0으로 되어 있는 2차원 배열 Returns: int: 가장 큰 정사각형의 넓이 """ row, calumn = len(board), len(board[0]) global_max = 0 for i in range(...
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import re def distribute(string, delim, groups=[r'\S+', r'\S+']): """Distributes one part of a string to other parts of that string (seperated by a delimiter), returning a list of strings. Args: string: input string delim: regex matching delimiter between two parts of string to be ...
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import random def generateColor(text): """Deterministically generates a colour for a given text.""" random.seed(text) return ('#%06X' % random.randint(0,0xFFFFFF))
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def unit_size(size): """ Convert Byte size to KB/MB/GB/TB. """ units = ['KB', 'MB', 'GB', 'TB'] i = 0 size = size / 1024 while size >= 1024 and i<(len(units)-1): i = i + 1 size = size / 1024 return '%.2f %s'%(size, units[i])
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def tally_output(cons_file, output_path, file_stem): """Writes a tally file for easy graphing/analysis.""" tally_file = "{}/{}.tally".format(output_path, file_stem) with open(cons_file, "r") as reader, open(tally_file, "w") as writer: for line in reader: if line.startswith('#'): writer.write(line.split(...
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def project_is_connected(project, user): """ Return True if the given project is connected (joined and authorized). """ return project.is_joined(user)
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def filter_lower_case_keys(dict): """ Filter dict to include only lower case keys. Used to skip HTTP response fields. :param dict: Dict with all capabilities parsed from the SSDP discovery. :return: Dict with lower case keys only. """ return {key: value for key, value in dict.items() if k...
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def supports_int(value: object) -> bool: # noqa: E302 """Check if an int-like object has been passed (:class:`~typing.SupportsInt`). Examples -------- .. code:: python >>> from nanoutils import supports_int >>> supports_int(1.0) True >>> supports_int(1.5) Fal...
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from typing import Callable from typing import Dict from typing import Any def memoized(func: Callable) -> Callable: """Decorator that caches values returned by a function for future calls. The first time func is called with a particular sequence of arguments, the result is computed as normal. Any subseq...
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def intify_and_make_intron(junction): """Convert start and stop strings to ints and shorten the interval Interval is shortened to match the introns of SJ.out.tab files from STAR Parameters ---------- junction : tuple (chrom, start, stop, strand) tuple of strings, e.g. ('chr1', '100...
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def get_value_for_key_from_json(key, data_structure): """ Given a data_structure return the *first* value of the key from the first dict example: data_structure: [ { "id": 1, "name": "name1" }, { "id": 2, "name": "name2"} ] key: "id" return 1 :param key: key of a dict of which t...
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import pickle def predict(dataX): """ Predict dependent variable from a features vector """ # load model model = pickle.load(open('model.pickle', 'rb')) # predict predY = model.predict(dataX.values.reshape(-1, dataX.shape[1])) return predY
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def format_pci_addr(pci_addr): """Pad a PCI address eg 0:0:1.1 becomes 0000:00:01.1 :param pci_addr: str :return pci_addr: str """ domain, bus, slot_func = pci_addr.split(':') slot, func = slot_func.split('.') return '{}:{}:{}.{}'.format(domain.zfill(4), bus.zfill(2), slot.zfill(2), ...
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import re def make_url_pattern(url: str, version: str) -> str: """Returns a regular expression for matching versioned download URLs. Args: url: Existing download URL for `version`. version: Version corresponding to `url` (must be a substring). Returns: Regular expression that matches URLs similar ...
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import re def parse_not_to_prune(model, config): """Returns a list of names of modules not to prune in the model""" patterns = [re.compile(s) for s in config.not_to_prune] parsed_not_to_prune = [] for name, module in model.named_modules(): if type(module).__name__ in config.prune_layer_types: ...
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def right(x): """Helper function: argument x must be a dot. Returns dot right of x.""" return (x[0]+1,x[1])
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def isMatch(peak, biomarker, tolerance): """Check if spectral peak matches protein biomarker Args: peak: Spectral peak obatained from experiment, float biomarker: An array of biomarker values tolerance: Maximal difference between experimental weight and theoretical one that coul...
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def create_stratum_name(stratification_name, stratum_name, joining_string="X"): """ generate a name string to represent a particular stratum within a requested stratification :param stratification_name: str the "stratification" or rationale for implementing the current stratification process :p...
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import socket def get_node_address(node_name=''): """ Return the IP address associated to the node's domain. This is by no means perfect and should not be relied upon aside from testing purpose. """ return socket.gethostbyname(socket.getfqdn(node_name))
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def extract_muMax(df_Annotations): """ Extracts the growth rate (Slope) for each sample. Parameters ---------- df_Annotations : pandas.DataFrame The dataframe contains the results of a linear fit through the exponential growth phase. Returns ------- df_mu : pandas.DataF...
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def _parse_system_prop(line): """Returns the name and value of a system property (The line is preceded by @). Args: line (str): The definition of the system property. Returns: str, str: Pair of name, value. """ return line[1:].split("#")[0].split("=")
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def pentad_to_month_day(p): """ Given a pentad number, return the month and day of the first day in the pentad :param p: pentad number from 1 to 73 :type p: integer :return: month and day of the first day of the pentad :rtype: integer """ assert 0 < p < 74, 'p outside allowe...
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def balance_from_utxos(utxos): """Return balance of a list of utxo. Args: utxos: A list of utxo with following format. [{ txid: '' value: 0, vout: 0, scriptPubKey: '', }] ...
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from typing import Counter def most_common_letter(s: str) -> str: """Returns the most common letter in a string.""" return Counter(s).most_common(1)[0][0]
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def captcha_halfway(numbers): """Sum the digits that match the one half way around a cyclic string.""" total = 0 for i in range(int(len(numbers) / 2)): if numbers[i] == numbers[i + int(len(numbers) / 2)]: total += int(numbers[i]) return total * 2
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def get_all_regions(config): """Retrieve a set of all regions used by the declared integration tests.""" regions = set() for feature in config.get("test-suites").values(): for test in feature.values(): for dimensions_config in test.values(): for dimensions_group in dimens...
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def keras_name_to_tf_name_block(keras_name, keras_block='block1a', tf_block='blocks_0', use_ema=True, model_name_tf='efficientnet-b0'): """Mapping name in h5 to ckpt that belongs to a block....
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def _format_version(name): """Formats the string name to be used in a --version flag.""" return name.replace("-", "_")
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import math def rho2_rho1(M, beta, gamma): """Density ratio across an olique shock (eq. 4.8) :param <float> M: Mach # upstream :param <float> Beta: Shock angle w.r.t initial flow direction (radians) :param <float> gamma: Specific heat ratio :return <float> Density ratio r2/r1 """ m1sb =...
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import logging import pathlib def collector(name, fields, filepath, append=False, format_types=None, delimiter='|'): """ Returns a function for collecting rows with fields :fields: (along with datetime information) in a CSV log file located at :filepath:. We often want to collect some data about choi...
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def print_network(net, out_f=None): """ Prints the number of learnable parameters. :param net: the network. :type net: :param out_f: file :type out_f: :return: number of learnable parameters. :rtype: int """ num_params = 0 for param in net.parameters(): num_params +=...
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def _skip_first_max_pooling(inputs): """Whether to skip the first max pooling layer in ResNet. For 128x128 inputs, we skip the first 3x3 2-stride max pooling layer. Args: inputs: The inputs passed to ResNet. Returns: Whether to skip the first max pooling layer in ResNet. """ dims = inputs.shape.d...
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def is_hom(G, H, hom): """ Check whether hom is a homomorphism from G to H. Works for both directed and undirected. """ assert set(G.vertices()) == set(hom.keys()) assert set(H.vertices()).issuperset(set(hom.values())) for e in G.edges(): u, v = e[0], e[1] if not H.has_edge(hom[u], hom[v]): ...
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from typing import List from typing import Any def lazy_content(__list: List, /, nvals: int, ellipsis: Any = ...) -> List: """Return list at most {nvals} items from object Extra values are replaced with mid_value Examples: >>> lazy_content([1, 2, 3, 4, 5], 3) ... [1, ..., 5] """ ...
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def clear_form(n_clicks): """Empty input textarea""" return ""
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def wrap_to_pmh(x, to2): """Wrap x to [-to/2,to/2).""" to = to2/2 return (x + to)%to2 - to
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def return_index(lbound, ubound, cells, position): """ Give the position of a node on a 1D mesh this function will return the corresponding index of that node in an array that holds the node positions. lbound: Lower bound of mesh domain. ubound: Upper bound of mesh domain. cells: Number of ...
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import huggingface_hub def list_metrics(with_community_metrics=True, with_details=False): """List all the metrics script available on the Hugging Face Hub. Args: with_community_metrics (:obj:`bool`, optional, default ``True``): Include the community provided metrics. with_details (:obj:`bool`...
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def pathCount(stairs: int): """number of unique ways to climb N stairs using 1 or 2 steps""" #we've reached the top if stairs == 0: return 1 else: if stairs < 2: return pathCount(stairs - 1) return pathCount(stairs - 2) + pathCount(stairs - 1)
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def _split_comment(lineno, comment): """Return the multiline comment at lineno split into a list of comment line numbers and the accompanying comment line""" return [(lineno + index, line) for index, line in enumerate(comment.splitlines())]
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def ts_path(path): """Make a URL path with a database and test suite embedded in them.""" return "/api/db_<string:db>/v4/<string:ts>/" + path
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def display_formatter(input_other_type): """ Used by QAbstractItemModel data method for Qt.DisplayRole Format any input value to a string :param input_other_type: :return: str """ return str(input_other_type)
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def first_name(s): """ Returns the first name in s Examples: last_name_first('Walker White') returns 'Walker' last_name_first('Walker White') returns 'Walker' Parameter s: a name 'first-name last-name' Precondition: s is a string 'first-name last-name' with one or more...
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def replace_keys(d, old, new): """replace keys in a dict.""" return {k.replace(old, new): v for k, v in d.items()}
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from typing import Union import io def _hash(fn, buffer: Union[io.StringIO, io.BytesIO]): """Partial function for generating checksum of binary content.""" buffer.seek(0) hashsum = fn() for chunk in iter(lambda: buffer.read(4096), b''): hashsum.update(chunk) return hashsum.hexdigest()
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import inspect def _num_required_args(func): """ Number of args for func >>> def foo(a, b, c=None): ... return a + b + c >>> _num_required_args(foo) 2 >>> def bar(*args): ... return sum(args) >>> print(_num_required_args(bar)) None borro...
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def expand(values, index, padding=128): """ Modify in place and return the list values[] by appending zeros to ensure that values[index] is not out of bounds. An error is raised if index is negative. """ assert index >= 0, f"Oops: negative index in expand(values, index={index})" if index...
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import typing import dataclasses def dataclass_from_dict(cls: type, src: typing.Dict[str, typing.Any]) -> typing.Any: """ Utility function to construct a dataclass object from dict """ field_types_lookup = {field.name: field.type for field in dataclasses.fields(cls)} constructor_inputs = {} f...
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from typing import Any def pm_assert( condition: Any, exc: Any=Exception, context: Any=None, msg: str="", ) -> Any: """ Generic assertion that can be used anywhere @condition: A condition to assert is true @exc: Raise if @condition is False @context: The relevant da...
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def resize_halo_datasets(halos_dset, new_size, write_halo_props_cont, dtype): """ Resizes the halo datasets Parameters ----------- halos_dset: dictionary, required new_size: scalar integer, required write_halo_props_cont: boolean, required Controls if the individual halo properti...
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def checksum(sentence): """Calculate and return checsum for given NMEA sentence""" crc = 0 for c in sentence: crc = crc ^ ord(c) crc = crc & 0xFF return crc
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def _apply_affine_scalar(i, j, k, affine_matrix): """ Applies an affine matrix to the given coordinates. The 3 values i, j and k must be scalars. The affine matrix consists of a 3x3 rotation matrix and a 3x1 transposition matrix (plus the last row). Parameters ---------- i, j, k: numeric scalars ...
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import re def get_dict(post, key): """ Extract from POST PHP-like arrays as dictionary. Example usage:: <input type="text" name="option[key1]" value="Val 1"> <input type="text" name="option[key2]" value="Val 2"> options = get_dict(request.POST, 'option') ...
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import json def json_load(file): """ load json data from file. """ with open(file, 'r', encoding='utf8') as _file: data = json.load(_file) return data
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from typing import Dict from typing import Any def severity(event: Dict[str, Any]) -> str: """Maps `score` of a Qualys event to `severity`. Possible `score` values: 0 = Known Good [File/Process/Network] 1 = Remediated [File/Process/Network] 2 = Suspicious Low File event 3 ...
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def get_diff(df, column1, column2): """Get the difference between two column values. Args: df: Pandas DataFrame. column1: First column. column2: Second column. Returns: Value of summed columns. Usage: df['item_quantity_vs_mean'] ...
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def int_to_bytes(number: int) -> bytes: """Convert integer to byte array in big endian format""" return number.to_bytes((number.bit_length() + 7) // 8, byteorder='big')
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import random def DEFAULTPOLICY(state): """ random policy :param state: from this state, run simulation with random action :return: final reward after reaching the final state """ while state.terminal() == False: # simulate until terminal state random_action = random.randint(0, 3) ...
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import hashlib from pathlib import Path def label_generator(predictions, processor, filename): """Generates a unique label for the image based on the predicted class, a hash, and the existing file extension. Parameters ---------- predictions : np.array Output from model showing each targe...
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import re def parse_csl_item_note(note): """ Return the dictionary of key-value pairs encoded in a CSL JSON note. Extracts both forms (line-entry and braced-entry) of key-value pairs from "cheater syntax" https://github.com/Juris-M/citeproc-js-docs/blob/93d7991d42b4a96b74b7281f38e168e365847e40/csl-jso...
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def field_is_required(field): """ Returns true if the field is required (e.g. not nullable) """ return getattr(field, 'required', False)
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from datetime import datetime def date_to_datetime(value): """Get datetime value converted from a date or datetime object :param date/datetime value: a date or datetime value to convert :return: datetime; input value converted to datetime >>> from datetime import date, datetime >>> from pyams_ut...
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def filter_set_options(options): """Filters out options that are not set.""" return {key: value for key, value in options.items() if value}
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def not_in_dict_or_none(dict, key): """ Check if a key exists in a map and if it's not None :param dict: map to look for key :param key: key to find :return: true if key is in dict and not None """ if key not in dict or dict[key] is None: return True else: return False
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def to_digits_base10(n): """ Return the digits of a number in base 10. """ digits = [] remaining = n while remaining > 0: digit = remaining % 10 remaining = (remaining - digit) // 10 digits.append(digit) return digits[::-1]
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def pbc(rnew, rold): """ Periodic boundary conditions for an msd calculation Args: rnew (:py:attr:`float`, optional): New atomic position rold (:py:attr:`float`, optional): Previous atomic position Returns: cross (:py:attr:`bool`, optional): Has the atom cross a PBC? rn...
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import requests def submit_task(task: dict, username: str, password: str) -> str: """ Submits a task using the AppEEARS API. Parameters ---------- task: dictionary following the AppEEARS API task object format username: Earthdata username password: Earthdata password Returns ...
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def compare_int(entry, num): """Return True if the integer matches the line entry, False otherwise.""" if int(entry) == num: return True else: return False
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def _prepare_params(params): """return params as SmashGG friendly query string""" query_string = '' if len(params) == 0: return query_string prefix = '?expand[]=' query_string = prefix + '&expand[]='.join(params) return query_string
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def load_settings(path='api/settings'): """Loads the user settings located under `api/`""" with open(path, 'r', encoding='utf-8') as file: return { l.strip(): r.strip() for l, r in (l.split('=') for l in file if l.strip()) }
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def get_mask(source, source_lengths): """ Args: source: [B, C, T] source_lengths: [B] Returns: mask: [B, 1, T] """ B, _, T = source.size() mask = source.new_ones((B, 1, T)) for i in range(B): mask[i, :, source_lengths[i]:] = 0 return mask
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import glob def get_all_html_files(directory): """ Returns list of html files located in the directory """ return glob.glob(directory + "/*.html")
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import csv def load_csv(csv_filename): """Load csv file generated py ```generate_training_testing_csv.py``` and parse contents into ingredients and labels lists Parameters ---------- csv_filename : str Name of csv file Returns ------- list[str] List of ingredient ...
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def largest_common_substring(query, target, max_overhang): """Return the largest common substring between `query` and `target`. Find the longest substring of query that is contained in target. If the common substring is too much smaller than `query` False is returned, else the location `(start, end)` ...
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