GPN-Star paper: https://www.biorxiv.org/content/10.1101/2025.09.21.677619v1 code: https://github.com/songlab-cal/gpn songlab/gpn-star-hg38-v100-200m 0.2B • Updated Sep 17, 2025 • 74 songlab/gpn-star-hg38-m447-200m 0.2B • Updated Sep 17, 2025 • 13 songlab/gpn-star-hg38-p243-200m 0.2B • Updated Sep 17, 2025 • 35 songlab/gpn-star-mm39-v35-85m 86.1M • Updated Sep 17, 2025
GPN https://www.pnas.org/doi/10.1073/pnas.2311219120 songlab/gpn-brassicales Fill-Mask • 65.9M • Updated Jan 28, 2025 • 463 • • 3 songlab/genomes-brassicales-balanced-v1 Viewer • Updated Jan 27, 2024 • 4.38M • 51 songlab/tokenizer-dna-mlm Updated Jan 27, 2024 • 2 gonzalobenegas/processed-data-arabidopsis Updated Jul 3, 2025 • 395
Sorghum gene expression prediction songlab/gxa-sorghum-v1 Viewer • Updated Jul 17, 2025 • 40.7k • 15 songlab/gpn-brassicales-gxa-sorghum-v1 Text Classification • 65.9M • Updated Aug 8, 2025 • 18
GPN-MSA https://www.nature.com/articles/s41587-024-02511-w songlab/gpn-msa-sapiens Fill-Mask • 85.7M • Updated Jan 27, 2025 • 169 • • 8 songlab/gpn-msa-hg38-scores Updated Jan 2, 2025 • 276 • 3 songlab/clinvar Viewer • Updated Jan 2, 2025 • 41k • 69 • 2 songlab/cosmic Viewer • Updated Dec 7, 2025 • 18.9k • 43 • 2
TraitGym https://www.biorxiv.org/content/10.1101/2025.02.11.637758v2 songlab/TraitGym Viewer • Updated Mar 25, 2025 • 16.7M • 588 • 9 Running 2 TraitGym Leaderboard 📊 2 Filter and view TraitGym leaderboard data songlab/gpn-animal-promoter Fill-Mask • 0.2B • Updated Jan 28, 2025 • 2 • 1 songlab/gpn-animal-promoter-dataset Viewer • Updated Jan 27, 2025 • 9.06M • 589 • 1
GPN-Star paper: https://www.biorxiv.org/content/10.1101/2025.09.21.677619v1 code: https://github.com/songlab-cal/gpn songlab/gpn-star-hg38-v100-200m 0.2B • Updated Sep 17, 2025 • 74 songlab/gpn-star-hg38-m447-200m 0.2B • Updated Sep 17, 2025 • 13 songlab/gpn-star-hg38-p243-200m 0.2B • Updated Sep 17, 2025 • 35 songlab/gpn-star-mm39-v35-85m 86.1M • Updated Sep 17, 2025
GPN-MSA https://www.nature.com/articles/s41587-024-02511-w songlab/gpn-msa-sapiens Fill-Mask • 85.7M • Updated Jan 27, 2025 • 169 • • 8 songlab/gpn-msa-hg38-scores Updated Jan 2, 2025 • 276 • 3 songlab/clinvar Viewer • Updated Jan 2, 2025 • 41k • 69 • 2 songlab/cosmic Viewer • Updated Dec 7, 2025 • 18.9k • 43 • 2
GPN https://www.pnas.org/doi/10.1073/pnas.2311219120 songlab/gpn-brassicales Fill-Mask • 65.9M • Updated Jan 28, 2025 • 463 • • 3 songlab/genomes-brassicales-balanced-v1 Viewer • Updated Jan 27, 2024 • 4.38M • 51 songlab/tokenizer-dna-mlm Updated Jan 27, 2024 • 2 gonzalobenegas/processed-data-arabidopsis Updated Jul 3, 2025 • 395
TraitGym https://www.biorxiv.org/content/10.1101/2025.02.11.637758v2 songlab/TraitGym Viewer • Updated Mar 25, 2025 • 16.7M • 588 • 9 Running 2 TraitGym Leaderboard 📊 2 Filter and view TraitGym leaderboard data songlab/gpn-animal-promoter Fill-Mask • 0.2B • Updated Jan 28, 2025 • 2 • 1 songlab/gpn-animal-promoter-dataset Viewer • Updated Jan 27, 2025 • 9.06M • 589 • 1
Sorghum gene expression prediction songlab/gxa-sorghum-v1 Viewer • Updated Jul 17, 2025 • 40.7k • 15 songlab/gpn-brassicales-gxa-sorghum-v1 Text Classification • 65.9M • Updated Aug 8, 2025 • 18
